DCJ2HP – Bayesian Sampling of Genomic Rearrangement Scenarios via Double Cut and Join

DCJ2HP

:: DESCRIPTION

DCJ2HP is a software of Bayesian sampling of genomic rearrangement scenarios via double cut and join. The Double Cut and Join (DCJ) model, while less relevant, is computationally easier than the Hannenhalli–Pevzner (HP) model. The author use the computational facilities of the DCJ model to draw a sampling of HP scenarios. It is based on a parallel MCMC method that cools down DCJ scenarios to HP scenarios

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::DEVELOPER

István Miklós ,   Eric Tannier

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/Windows/MacOsx
  • Java

 DCJ2HP

:: MORE INFORMATION

Citation

Bioinformatics. 2010 Dec 15;26(24):3012-9. Epub 2010 Oct 29.
Bayesian sampling of genomic rearrangement scenarios via double cut and join.
Miklós I, Tannier E.

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