2011 July
- MolScript 2.1.2 – Display Molecular 3D Structures
- jSim for Gromacs 0.63b – Graphical User Interface for Gromacs
- Maptools 1.0 – Deal with Experimental (X-ray, EM) 3D Maps
- tCONCOORD 1.0 – Predict Protein Conformational Flexibility
- LifeExplorer 20100108 – 3D Navigation Tool for Cells
- Open Discovery 3.0 – Live Linux Platform of Bioinformatics Tools
- BioconductorBuntu – Web-Based DNA Microarray Analysis Server
- BioSLAX 7.5 – BioInformatics LiveCD Suite
- VLinux 2.0 alpha 2 – Linux Workbench for Bioinformatics
- BioPuppy 2.0 beta – Workbench for Bioinformatics and Computational Biology
- SPC Proteomics Tools 060107 – CDROM Image for SPC tools
- Mouse Atlas Data Analysis CD-ROMs 0403
- bioknoppix 0.2.1 – Knoppix Linux Live CD for Molecular Biologist
- Quantian 0.7.9.2 – Knoppix / Debian Variant Tailored to Numerical and Quantitative Analysis
- KNOB 4.1 – CD-bootable Linux for bioinformatics
- VigyaanCD 1.0 – Workbench for Bioinformatics
- BioStat 5.3.0 – Biology Statistical Software
- GLay – Cytoscape Plugin of Community Analysis
- PBAT 3.6.7 – Pedigree Based Association Test
- Lab Assistant 1.1 – Manage Experiment
- EnzymeX 3.1 – Determine Restriction Enzymes
- 4Peaks 1.7 – View & Edit DNA Sequence Trace Files
- PubMed Alert Me! 2.0 – Automate PubMed Literature Search
- PubCrawler 2.13 – Update Alerting Service for PubMed and GenBank
- Recco 0.93 – Recombination Analysis Using Cost Optimization
- CHROMA 1.0 – Annotated Multiple Sequence Alignments
- RISCI – Repeat Induced Sequence Change Identifier
- SnS-Align – Alignment of Distantly related Proteins
- ISD 1.1 – Bayesian NMR Structure Calculation
- DensityFit 1.0 – Analysis of Electronic Density Map for Protein
- DomainFinder 2.0.4 – Determine Dynamical Domains in Protein
- Topali 2.5 – Statistical & Evolutionary Analysis of Multiple Sequence Alignments
- BioSeqAnalyzer 1.0 – Analyze DNA and Protein Sequences
- QAlign 2.10 – Quality-Based Alignments including Phylogenetic Analysis
- Align-m 2.3 – Multiple Sequence Alignment
- GENtle 1.9.4 – Tool for Genetics and Biochemistry
- YASS 1.14 – Genomic Similarity Search Tool
- Laj 070222 – Alignment Viewer
- Mauve 2.3.1 – Multiple Genome Alignments
- NeoBio 1.0 pre-alpha – Sequence alignment algorithms in Java
- Lalnview 3.0 – Graphical Viewer for Pairwise Sequence Alignments
- ESTate – Expressed Sequence Tag Analysis Tools Etc
- Exonerate 2.2 – Generic Tool for Sequence Alignment
- DNAMAN 7.0 – Integrated System for Sequence Analysis
- iTree 1.0 – Scalable Multithreaded Phylogenomic Pipeline
- PhyloSort 1.3 – Phylogenetic Sorting Tool
- RAT 1.0 – Recombination Analysis Tool for High Throughput Analysis of Genomic Sequence
- newicktree 1.1 – LaTeX package for Drawing of Phylogenetic Trees
- mswordtree 1.0 – MS Word Macro for Drawing of Phylogenetic Trees
- MPP 2.0 – Microarray-to-Phylogeny Pipeline
- Grid Map 3.0a-beta – Displays Genome Mapping Data in a Grid Format
- GMV 1.0c-beta – Genome Map Viewer
- CGHdist 1.0 – Calculates Mximum Likelihood-based Distances from Gene Content
- ARCADE 0.1 beta – Query and Visualize Data from Multiple Databases
- GENOME EXPLORER 1.0 – Comparative Genome Analysis
- WinBlast 0.2.0 – Windows Fraphical Front-end for NCBI BLAST
- SeqVISTA 1.81 – Sequence Feature Visualization & Comparison
- PhyloGrapher 20030403 – Graph Drawing of Biological Data
- ISYS 1.35 – Platform for Integrating Heterogeneous Bioinformatic Resources
- Sequence Extractor 1.1 – Generates Restriction Map and PCR Primer Map
- SMS 2 – Sequence Manipulation Suite
- Jellyfish 3.3.1 – Sequence Analysis Software
- Vector NTI Viewer 4.0.1 – Read DNA Sequence Data from GenBank, EMBL or FASTA files
- Genamics Expression 1.1 – DNA and Protein Sequence Analysis
- DNASIS MAX 3.0 – Bioinformatics Software for DNA/RNA/Amino Acid Sequence Analysis
- Identitag – Tag-to-gene Mapping
- CpGProD – Predict Mammalian Promoters Associated with CpG Islands
- MPI-PHYLIP – Parallelizing Computationally Intensive Phylogenetic Analysis
- Volume Browser 2.0.393 – View Three Dimensional Images over the internet
- GeneDoc 2.7.0 – Multiple Sequence Alignment Editor
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