Mar 172014
 

CycSim 1.0.1

:: DESCRIPTION

CycSim is a web application dedicated to in silico experiments with genome-scale metabolic models coupled to the exploration of knowledge from BioCyc and KEGG. Specifically, CycSim supports the design of knockout experiments: simulation of growth phenotypes of single or multiple gene deletions mutants on specified media, comparison of these predictions with experimental phenotypes and direct visualization of both on metabolic maps.

::DEVELOPER

Computational Systems Biology Group, Genoscope – Institut de Génomique – CEA

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

  NO

:: MORE INFORMATION

Citation

Bioinformatics. 2009 Aug 1;25(15):1987-8. doi: 10.1093/bioinformatics/btp268. Epub 2009 May 6.
CycSim–an online tool for exploring and experimenting with genome-scale metabolic models.
Le Fèvre F, Smidtas S, Combe C, Durot M, d’Alché-Buc F, Schachter V.

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