CplexA is a Mathematica package that uses functional programming to efficiently compute probabilities and average properties over such exponentially large number of states from the energetics of the interactions. The package is particularly suited to study gene expression at complex promoters controlled by multiple, local and distal, DNA binding sites for transcription factors.
Biophysics Unit , University of the Basque Country
- Windows / Linux / Mac OsX
:: MORE INFORMATION
J. M. G. Vilar and L. Saiz, CplexA: a Mathematica package to study macromolecular-assembly control of gene expression, Bioinformatics 26, 2060-2061 (2010).