Feb 022015
 

Cortex 1.05.21

:: DESCRIPTION

Cortex is an efficient and low-memory software framework for analysis of genomes using sequence data. There are two main executables, being developed in parallel streams: cortex_con (primary contact Mario Caccamo) is for consensus genome assembly, and cortex_var (primary contact Zamin Iqbal) is for variation and population assembly.

::DEVELOPER

The Genome Analysis Centre (TGAC)

:: SCREENSHOTS

N/a

:: REQUIREMENTS

  • Linux
  • C compiler

:: DOWNLOAD

 Cortex

:: MORE INFORMATION

Citation

Nat Genet. 2012 Jan 8;44(2):226-32. doi: 10.1038/ng.1028.
De novo assembly and genotyping of variants using colored de Bruijn graphs.
Iqbal Z, Caccamo M, Turner I, Flicek P, McVean G.

120 views

Sorry, the comment form is closed at this time.