Oct 172015
 

ContextMap 2.5.0

:: DESCRIPTION

ContextMap is a very accurate read mapping tool for data from RNA-seq experiments. It can be used to refine mappings provided by other tools or as a standalone program.

::DEVELOPER

Institute for Bioinformatics, Ludwig-Maximilians-Universität München

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ MacOsX

:: DOWNLOAD

 ContextMap

:: MORE INFORMATION

Citation

ContextMap 2: fast and accurate context-based RNA-seq mapping.
Bonfert T, Kirner E, Csaba G, Zimmer R, Friedel CC.
BMC Bioinformatics. 2015 Apr 17;16(1):122. doi: 10.1186/s12859-015-0557-5.

Thomas Bonfert, Gergely Csaba, Ralf Zimmer, Caroline C. Friedel.
A context-based approach to identify the most likely mapping for RNA-seq experiments.
BMC Bioinformatics, vol 13(Suppl 6), pp. S9, 2012.

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