COMPETE is a software package for calculating the probability of DNA occupancy by a collection of DNA binding factors, including transcription factors, nucleosomes, and the origin recognition complex. Its goal is to be high performance, flexible, and extensible.
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An ensemble model of competitive multi-factor binding of the genome.
Wasson T, Hartemink AJ.
Genome Res. 2009 Nov;19(11):2101-12. doi: 10.1101/gr.093450.109.