compcodeR is an R package for comparing the results of multiple differential expression analysis methods applied to a common RNAseq data set. It also contains functionalities for simulating realistic count matrices and interfaces to several of the most widely used differential expression analysis methods for RNAseq data.
Charlotte Soneson <Charlotte.Soneson at isb-sib.ch>
- Linux/ Windows/ MacOsX
- R package
:: MORE INFORMATION
Bioinformatics. 2014 May 9. [Epub ahead of print]
compcodeR – an R package for benchmarking differential expression methods for RNA-seq data.