COCACOLA – Binning Metagenomic Contigs using Sequence COmposition, Read CoverAge, CO-alignment, and Paired-end Read LinkAge

COCACOLA

:: DESCRIPTION

COCACOLA is a general framework that combines different types of information: sequence COmposition, CoverAge across multiple samples, CO-alignment to reference genomes and paired-end reads LinkAge to automatically bin contigs into OTUs.

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::DEVELOPER

COCACOLA team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • MatLab

:: DOWNLOAD

 COCACOLA

:: MORE INFORMATION

Citation

COCACOLA: binning metagenomic contigs using sequence COmposition, read CoverAge, CO-alignment, and paired-end read LinkAge.
Lu YY, Chen T, Fuhrman JA, Sun F.
Bioinformatics. 2016 Jun 2. pii: btw290.