CNVstat is a command-line program written in C for the statistical association analysis of CNVs and SNPs. CNVstat allows the user to estimate or test the effects of CNVs and SNPs by maximizing the (observed-data) likelihood that properly accounts for differential measurement errors and calling uncertainties.
:: MORE INFORMATION
Hu, Y. J., Lin, D. Y. Sun, W., and Zeng, D.
“A Likelihood-Based Framework for Association Analysis of Allele-Specific Copy Numbers”.
Submitted for publication.