May 062016
 

CNAnorm 1.19.0

:: DESCRIPTION

CNAnorm is an R package to perform normalisation of copy number from next generation sequence data, taking into account tumour cell content and possible aneuploid genome size.

::DEVELOPER

the LICP Pre-Cancer Genomics Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ MacOsX / Windows
  • R package
  • Bioconductor

:: DOWNLOAD

 CNAnorm

:: MORE INFORMATION

Citation

Bioinformatics. 2012 Jan 1;28(1):40-7. doi: 10.1093/bioinformatics/btr593. Epub 2011 Oct 28.
Correcting for cancer genome size and tumour cell content enables better estimation of copy number alterations from next-generation sequence data.
Gusnanto A, Wood HM, Pawitan Y, Rabbitts P, Berri S.

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