CMEIAS (Center for Microbial Ecology Image Analysis Software) is a free image analysis software tools designed to strengthen microscopy-based approaches for understanding microbial ecology. CMEIAS provide a powerful quantitative approach to analyze ecophysiological and spatial features that complement molecular microbial ecology approaches to analyze complex microbial communities in situ without cultivation.
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Liu J., F.B. Dazzo, O. Glagoleva, B. Yu, A.K. Jain. 2001.
CMEIAS: A computer-aided system for the image analysis of bacterial morphotypes in microbial communities.
Microbial Ecology 41(3): 173-194 and 42: 215.