Cluster-Trainer is an auxiliary program for use with Cluster-Buster. It estimates optimal ‘motif weights’ to use with Cluster-Buster. These weights can also be interpreted as abundances of the motifs (occurences per kb). Given a set of DNA sequences and a set of motif definitions, Cluster-Trainer will estimate how abundant each motif is in the sequences, and the average distance between neighboring motifs.
- Linux / SUN Solaris 8 / SGI/IRIX
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