Aug 092012
 

Clover 20120216

:: DESCRIPTION

Clover (Cis-eLement OVERrepresentation) is a program for identifying functional sites in DNA sequences. If you give it a set of DNA sequences that share a common function, it will compare them to a library of sequence motifs (e.g. transcription factor binding patterns), and identify which if any of the motifs are statistically overrepresented in the sequence set.

::DEVELOPER

Zlab

:: SCREENSHOTS

Command Line

:: REQUIREMENTS

  • Windows / Mac OsX / Linux / SUN Solaris 8 / SGI/IRIX

:: DOWNLOAD

Clover ; Source Code

:: MORE INFORMATION

Citation:

Martin C Frith, Yutao Fu, Liqun Yu, Jiang-Fan Chen, Ulla Hansen, Zhiping Weng (2004). Detection of functional DNA motifs via statistical over-representation. Nucleic Acids Research 32(4):1372-81.

 

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