Oct 102013
 

CLEAN  1.3.1

:: DESCRIPTION

 CLEAN is a computational framework for analytically and visually integrating knowledge-based functional categories with the cluster analysis of genomics data. The framework is based on the simple, conceptually appealing, and biologically interpretable gene-specific functional coherence score (CLEAN score). The score is derived by correlating the clustering structure as a whole with functional categories of interest.

:: DEVELOPER

Laboratory for Statistical Genomics, Univ. Cincinnati

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/MacOsX/Windows
  • R Package

:: DOWNLOAD

 CLEAN

:: MORE INFORMATION

Citation:

Freudenberg JM, Joshi VK, Hu Z, Medvedovic M.
CLEAN: CLustering Enrichment ANalysis.
BMC Bioinformatics (2009) 10:234. Pubmed. Poster presented at OCCBIO 2008.

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