Jan 102012
 

CisModScan 20050417

:: DESCRIPTION

CisModScan: Scanning for cis-regulatory modules with given motif weight matrices.

::DEVELOPER

Qing Zhou

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/Windows/MacOsX

:: DOWNLOAD

 CisModScan

:: MORE INFORMATION

Related papers:
1) Johnson, D.S., Zhou, Q., Yagi, K., Satoh, N., Wong, W.H., and Sidow, A. (2005). De dovo discovery of a tissue-specific gene regulatory module in a chordate. Genome Research, 15: 1315-1324.
2) Zhou, Q. and Wong, W.H. (2004). CisModule: De novo discovery of cis-regulatory modules by hierarchical mixture modeling. Proceedings of the National Academy of Sciences USA, 101: 12114-12119.

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