Jul 302013
 

ChIP-PED 0.99.2

:: DESCRIPTION

ChIP-PED is designed to enhance the analysis of ChIP-chip and ChIP-seq (ChIPx) data. Given the target genes of a TF in one or more cell types, ChIP-PED searches for new biological systems potentially enriched with regulatory activity of the TF by superimposing ChIPx data on large amounts of Publicly available human and mouse gene Expression Data from a diverse collection of biological systems.

::DEVELOPER

George Wu

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux/MacOsX
  • R package

:: DOWNLOAD

 ChIP-PED

:: MORE INFORMATION

Citation

Bioinformatics. 2013 May 1;29(9):1182-9. doi: 10.1093/bioinformatics/btt108. Epub 2013 Mar 1.
ChIP-PED enhances the analysis of ChIP-seq and ChIP-chip data.
Wu G, Yustein JT, McCall MN, Zilliox M, Irizarry RA, Zeller K, Dang CV, Ji H.

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