CCHMM (Coiled-Coil Domains with Hidden Markov Models) is a predictor of coiled-coil segments in proteins. The software bases on hidden Markov models that complement the existing methods and outperforms them in the task of locating structurally-defined coiled-coil segments.
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Prediction of Structurally-Determined Coiled-Coil Domains with Hidden Markov Models
Piero Fariselli, Daniele Molinini, Rita Casadio and Anders Krogh
Lecture Notes in Computer Science, 2007, Volume 4414, Bioinformatics Research and Development, Pages 292-302