CBA (Consistency Based Alignment) builds multiple structure alignments from pairwise superpositions using consistency as a driving force.The software harnesses the information contained within regions that are consistently aligned among a set of pairwise superpositions in order to realign pairs of proteins through both global and local refinement methods. It then constructs a multiple alignment that is maximally consistent with the improved pairwise alignments.
- C Complier
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Jessica Ebert and Douglas Brutlag*
Development and validation of a consistency based multiple structure alignment algorithm
Bioinformatics (2006) 22 (9): 1080-1087