Sep 062015
 

CapFilter

:: DESCRIPTION

CapFilter is a straightforward annotation-agnostic computational pipeline that greatly increases confidence in predicted TSSs and allows tuning by the end-user to balance both precision and sensitivity of TSS identification to address experimental needs.

::DEVELOPER

Megraw Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 CapFilter

:: MORE INFORMATION

Citation

Jason S. Cumbie, Maria G. Ivanchenko, and Molly Megraw. (2015).
NanoCAGE-XL and CapFilter: an approach to genome wide identification of high confidence transcription start sites.
BMC Genomics, 16:597. doi:10.1186/s12864-015-1670-6

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