May 222014
 

Cake 1.0

:: DESCRIPTION

Cake is a bioinformatics software pipeline that integrates four publicly available somatic variant-calling algorithms to identify single nucleotide variants with higher sensitivity and accuracy than any one algorithm alone.

::DEVELOPER

Experimental Cancer Genetics

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / MacOsX
  • Perl

:: DOWNLOAD

 Cake

:: MORE INFORMATION

Citation

Bioinformatics. 2013 Sep 1;29(17):2208-10. doi: 10.1093/bioinformatics/btt371. Epub 2013 Jun 25.
Cake: a bioinformatics pipeline for the integrated analysis of somatic variants in cancer genomes.
Rashid M1, Robles-Espinoza CD, Rust AG, Adams DJ.

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