Nov 032013
 

CAGT r132

:: DESCRIPTION

CAGT is a tool to analyze the heterogeneity and diversity of the magnitude, shape and orientation of patterns of functional genomics signal tracks (such as histone modification ChIP-seq signal) around a specific set of defined genomic anchor points (e.g. TF binding sites or TSSs)

::DEVELOPER

The Batzoglou Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows/MacOsX
  • Matlab

:: DOWNLOAD

 CAGT

:: MORE INFORMATION

Citation

Genome Res. 2012 Sep;22(9):1735-47. doi: 10.1101/gr.136366.111.
Ubiquitous heterogeneity and asymmetry of the chromatin environment at regulatory elements.
Kundaje A, Kyriazopoulou-Panagiotopoulou S, Libbrecht M, Smith CL, Raha D, Winters EE, Johnson SM, Snyder M, Batzoglou S, Sidow A.

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