CADBURE 20150810 – Evaluating Aligner performance on your RNA-Seq dataset

CADBURE 20150810

:: DESCRIPTION

The purpose of CADBURE (Comparing Alignment results of user Data Based on the relative reliability and advantage of Uniquely aligned REads) is to evaluate spliced aligner performance on user’s RNA-Seq data by comparing a pair of alignment results obtained either from two different aligners with the similar parameter set or from two different parameter sets with the same aligner.

::DEVELOPER

Liang Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Perl

:: DOWNLOAD

 CADBURE

:: MORE INFORMATION

Citation

Sci Rep. 2015 Aug 25;5:13443. doi: 10.1038/srep13443.
CADBURE: A generic tool to evaluate the performance of spliced aligners on RNA-Seq data.
Kumar PK, Hoang TV, Robinson ML, Tsonis PA, Liang C