BUSCO v1.1b1 – Assessing Genome Assembly and Annotation Completeness with Single-copy Orthologs

BUSCO v1.1b1

:: DESCRIPTION

BUSCO completeness assessment employs sets of Benchmarking Universal Single-Copy Orthologs from OrthoDB to provide quantitative measures of the completeness of genome assemblies, annotated gene sets, and transcriptomes in terms of expected gene content.

Advertisement

::DEVELOPER

Zdobnov’s Computational Evolutionary Genomics Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Python
  • NCBI BLAST+
  • HMMER (HMMER 3.1b2)
  • Augustus 3.0.x

:: DOWNLOAD

 BUSCO

:: MORE INFORMATION

Citation

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs.
Simão FA, Waterhouse RM, Ioannidis P, Kriventseva EV, Zdobnov EM.
Bioinformatics. 2015 Jun 9. pii: btv351.