BioQuali analyses regulatory networks and expression datasets by checking a global consistency between the regulatory model and the expression data. It diagnoses a regulatory network searching for the regulations that are not consistent with the expression data, and it outputs a set of genes which predicted expression is decided in order to explain the expression data provided.
the Symbiose project at IRISA-INRIA, Rennes, France.
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BioQuali Cytoscape plugin: analysing the global consistency of regulatory networks
Carito Guziolowski , Annabel Bourdé , Francois Moreews and Anne Siege
BMC Genomics 2009, 10:244doi:10.1186/1471-2164-10-244