Biocellion is an agent-PDE (Partial Differential Equation) based simulation framework, designed for solving general models of multicellular biological systems.
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Biocellion: accelerating computer simulation of multicellular biological system models.
Kang S, Kahan S, McDermott J, Flann N, Shmulevich I.
Bioinformatics. 2014 Jul 26. pii: btu498.