Bayesian Joint Analysis
Bayesian Joint Analysis is an approach to address the two key questions in parallel, which incorporates the information of functional annotations into expression data analysis and meanwhile infer the enrichment of functional groups.
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Wang X, Chen M, Khodursky AB and Xiao G,
Bayesian Joint Analysis of Gene Expression Data and Gene Functional Annotations,
Statistics in Biosciences. 2012 Nov; 4(2): 300-318