BarraCUDA is a GPGPU sequence alignment software that is based on BWA, to accelerate the alignment of sequencing reads generated by these instruments to a reference DNA sequence.
- NVIDIA CUDA
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BMC Res Notes. 2012 Jan 13;5:27. doi: 10.1186/1756-0500-5-27.
BarraCUDA – a fast short read sequence aligner using graphics processing units.
Klus P, Lam S, Lyberg D, Cheung MS, Pullan G, McFarlane I, Yeo GSh, Lam BY.