BarraCUDA 0.7.0 – Short Read Sequence Aligner using Graphics Processing Units

BarraCUDA 0.7.0

:: DESCRIPTION

BarraCUDA is a GPGPU sequence alignment software that is based on BWA, to accelerate the alignment of sequencing reads generated by these instruments to a reference DNA sequence.

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::DEVELOPER

the Metabolic Research Laboratories,  University of Cambridge.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • NVIDIA CUDA

:: DOWNLOAD

 BarraCUDA

:: MORE INFORMATION

Citation

BMC Res Notes. 2012 Jan 13;5:27. doi: 10.1186/1756-0500-5-27.
BarraCUDA – a fast short read sequence aligner using graphics processing units.
Klus P, Lam S, Lyberg D, Cheung MS, Pullan G, McFarlane I, Yeo GSh, Lam BY.