Mar 232015
 

bamchop

:: DESCRIPTION

bamchop is a robust program to efficiently summarize key statistical metrics of HTS data stored in BAM files, and to visually present the results in a formatted report.

::DEVELOPER

The Department of Biomedical and Health Informatics (DBHi)

:: SCREENSHOTS

n/a

:: REQUIREMENTS

  • Linux
  • R
  • LaTeX

:: DOWNLOAD

 bamchop

:: MORE INFORMATION

Citation:

BMC Bioinformatics. 2013;14 Suppl 11:S3. doi: 10.1186/1471-2105-14-S11-S3. Epub 2013 Sep 13.
Efficient digest of high-throughput sequencing data in a reproducible report.
Zhang Z, Leipzig J, Sasson A, Yu AM, Perin JC, Xie HM, Sarmady M, Warren PV, White PS.

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