ARTS (Alignment of RNA Tertiary Structures) is a method for aligning two nucleic acid structures (RNAs or DNAs) and detecting a-priori unknown common substructures.The identified common substructures can be either large global folds containing hundreds and even thousands of nucleotides or small local tertiary motifs with at least two successive base pairs.
Oranit Dror (email@example.com) , BioInfo3D group
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O. Dror, R. Nussinov, and H. J. Wolfson (2006).
The ARTS web server for aligning RNA tertiary structures,
Nucleic Acids Research, 34, W412-W415