May 312015
 

aroma.affymetrix 2.13.2

:: DESCRIPTION

Aroma.affymetrix is an R package for analyzing large Affymetrix data sets.  It allows you to analyze 100-1,000s of arrays of various chip types, e.g. expression arrays, SNP chips, exon arrays and so on.

::DEVELOPER

Henrik Bengtsson et al. 

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/MacOsX/Windows
  • R package

:: DOWNLOAD

 aroma.affymetrix

:: MORE INFORMATION

Citation

ACNE: a summarization method to estimate allele-specific copy numbers for Affymetrix SNP arrays.
Ortiz-Estevez M, Bengtsson H, Rubio A.
Bioinformatics. 2010 Aug 1;26(15):1827-33. doi: 10.1093/bioinformatics/btq300

Estimation and assessment of raw copy numbers at the single locus level.
Bengtsson H, Irizarry R, Carvalho B, Speed TP.
Bioinformatics. 2008 Mar 15;24(6):759-67. doi: 10.1093/bioinformatics/btn016.

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