AMINONET is a Java-based software tool to construct different protein contact networks (unweighted and weighted; long range, short range and any range; hydrophobic, hydrophilic, charged or all-amino-acid networks). The networks thus constructed can be visualized. The software will also help in the calculation of the values of the different topological parameters of the constructed networks.
Md. Aftabuddin, Sudip Kundu
- Windows / Mac / Linux
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Md. Aftabuddin and S. Kundu
AMINONET – a tool to construct and visualize amino acid networks, and to calculate topological parameters
J. Appl. Cryst. (2010). 43, 367-369