AltAnalyze 2.0.8.1 – Microarry and RNA-Seq Analysis

AltAnalyze 2.0.8.1

:: DESCRIPTION

AltAnalyze is an easy-to-use application for microarry and RNA-Seq analysis. For splicing sensitive platforms (RNA-Seq or Affymetrix Exon, Gene and Junction arrays), AltAnalyze will assess alternative exon expression along protein isoforms, domain composition and microRNA targeting. In addition to splicing-sensitive platforms, AltAnalyze provides comprehensive methods for conventional arrays (RMA summarization, QC, statistics, annotation, clustering, lineage characterization and gene-set enrichement).

::DEVELOPER

AltAnalyze Team

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows/Linux / MacOsX
  • Python

:: DOWNLOAD

 AltAnalyze

:: MORE INFORMATION

Citation:

Nucleic Acids Res. 2010 Jul;38(Web Server issue):W755-62. Epub 2010 May 31.
AltAnalyze and DomainGraph: analyzing and visualizing exon expression data.
Emig D, Salomonis N, Baumbach J, Lengauer T, Conklin BR, Albrecht M.