Jan 082012
 

Alnpack 2.1

:: DESCRIPTION

Alnpack is a set of programs and a C++ library for pairwise local alignment of DNA or protein sequences using Smith-Waterman algorithm.

:: DEVELOPER

Genetic Information Research Institute

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/Windows/MacOsX
  • C++ compiler

:: DOWNLOAD

  Alnpack

:: MORE INFORMATION

Citation:

Farrar M.
Striped Smith-Waterman speeds database searches six times over other SIMD implementations.
Bioinformatics. 2007 Jan 15;23(2):156-61. Epub 2006 Nov 16.

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