ALIGN (Pairwise alignment) is a tool designed for performing sequence alignments in a wide variety of combinations. It implements sequence to sequence, sequence to profile and profile to profile alignments with optional support of secondary structure. Different alignment options are freely selectable and include alignment types (local, global, free-shift) and number of sub-optimal results to report.
- C++ Compiler
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Curr Drug Discov Technol. 2006 Sep;3(3):167-73.
Align: a C++ class library and web server for rapid sequence alignment prototyping.
Tosatto SC, Albiero A, Mantovan A, Ferrari C, Bindewald E, Toppo S.