Sep 062012
 

AffyGCQC 1.02

:: DESCRIPTION

AffyGCQC is the acronym for a bioinformatics tool designed to perform Affymetrix GeneChip Quality Control. This program implements a graphical representation of QC metrics recommended by Affymetrix for GeneChip oligonucleotide array technology. Most importantly, it performs extreme studentized deviate statistical tests for the set of arrays being compared in a given experiment, thus providing an objective measure for outlier detection.

DEVELOPER

Osorio Y Fortéa J, Prina E, Lang T, Milon G, Davory C, Coppée JY, Regnault B.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / Linux / MacOsX
  • Apache
  • R Package
  • Perl

:: DOWNLOAD

 AffyGCQC

:: MORE INFORMATION

Citation

J Bioinform Comput Biol. 2008 Apr;6(2):317-34.
AffyGCQC: a web-based interface to detect outlying genechips with extreme studentized deviate tests.
Osorio Y Fortéa J, Prina E, Lang T, Milon G, Davory C, Coppée JY, Regnault B.

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