Jun 072015
 

affy2sv 1.0.12

:: DESCRIPTION

affy2sv contains a set of tools to extract the required files for analyzing different structural variants (CNVs, mosaicisms, inversions) from Affymetrix .CEL files (Genome Wide, Axiom and CytoScan HD).

::DEVELOPER

Juan R. González

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows/ MacOsX
  • R

:: DOWNLOAD

 affy2sv

:: MORE INFORMATION

Citation

affy2sv: an R package to pre-process Affymetrix CytoScan HD and 750K arrays for SNP, CNV, inversion and mosaicism calling.
Hernandez-Ferrer C, Quintela Garcia I, Danielski K, Carracedo á, Pérez-Jurado LA, González JR.
BMC Bioinformatics. 2015 May 20;16:167. doi: 10.1186/s12859-015-0608-y.

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