Apr 302015
 

ADTEx 2.0

:: DESCRIPTION

ADTEx is a freely available software package coded using R statistical language and Python to detect somatic copy number variations (CNVs) and genotypes in tumour whole exome samples. ADTEx is suitable for paired tumour/matched normal samples.

::DEVELOPER

Kaushalya Amarasinghe <kaushalya.amarasinghe@unimelb.edu.au>

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • R
  • Python
  • BedTOol

:: DOWNLOAD

 ADTEx

:: MORE INFORMATION

Citation:

BMC Genomics. 2014 Aug 28;15:732. doi: 10.1186/1471-2164-15-732.
Inferring copy number and genotype in tumour exome data.
Amarasinghe KC, Li J, Hunter SM, Ryland GL, Cowin PA, Campbell IG, Halgamuge SK

51 views

Sorry, the comment form is closed at this time.