ACRE is a JAVA-based tool that enumerates all the biochemical reaction networks that consist of user-created nodes from user-selected modules under user-specified constraints; applies Shinar and Feinberg’s theorem (Shinar and Feinberg, Science, 2010); and determines which of the networks have the absolute concentration robustness property.
Structural and Functional Bioinformatics Group, King Abdullah University of Science and Technology
- Linux / Windows / MacOsX
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X Gao, I Almasri, B Arkasosy, and H Kuwahara.
ACRE: Absolute concentration robustness exploration in module-based networks.