Sep 022012
 

ABySS-Explorer 1.3.4

:: DESCRIPTION

ABySS-Explorer is an interactive Java application that employs a novel graph-based representation to display a sequence assembly and associated meta data. The tool was designed with the ABySS sequence assembler in mind and was motivated by the need to examine assembly structure, in particular contig connectivity and supporting paired-end read relationships.

::DEVELOPER

Cydney Nielsen

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows / Mac /  Linux
  • Java

:: DOWNLOAD

 ABySS-Explorer 

:: MORE INFORMATION

Citation

Nielsen CB, Jackman SD, Birol I, Jones SJM.
ABySS-Explorer: Visualizing genome sequence assemblies.
IEEE Transactions on Visualization and Computer Graphics (Proceedings Visualization / Information Visualization 2009). 2009. 15(6):881-8.

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