Dec 302012
 

3SEQ 1.1.0812

:: DESCRIPTION

3SEQ is a software program for identifying mosaic structure or recombination in nucleotide sequence data. 3SEQ takes as input a data set with a minimum of three aligned sequences, and it tests whether any sequence in the data set is a recombinant or mosaic of any other two sequences in the data set.

::DEVELOPER

the Mathematical Modeling and Bioinformatics Group at the Oxford University Clinical Research Unit (OUCRU)

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / MacOsX / Windows
  • C++ Compiler

:: DOWNLOAD

  3SEQ 

:: MORE INFORMATION

Citation

Boni MF, Posada D, Feldman MW.
An exact nonparametric method for inferring mosaic structure in sequence triplets.
Genetics, 176:1035-1047, 2007.

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